MRIQC: individual bold report

Summary

  • BIDS filename: sub-1003_task-MID_run-01_bold.
  • Date and time: 2020-01-13, 18:12.
  • MRIQC version: 0.15.1.
  • Workflow details:
    • Framewise Displacement was computed using AFNI 3dvolreg
    • Framewise Displacement threshold was defined at 0.200000 mm

Visual reports

BOLD average
Standard deviation map
FMRI summary plot
Spikes

No high-frequency spikes were found in this dataset

ICA components

Other

aor0.0022056226415094336
aqi0.009034218603773585
dummy_trs0
dvarsnstd31.7371008251894
dvarsstd1.4071136916287883
dvarsvstd1.0105684950757579
efc0.41207227861456885
fber3860.235595703125
fdmean0.171448164939292
fdnum91
fdperc34.339622641509436
fwhmavg2.4864944444444443
fwhmx2.31994
fwhmy2.77554
fwhmz2.3640033333333332
gcor0.0162828
gsrx-0.020408356562256813
gsry0.011944868601858616
sizet265
sizex80
sizey80
sizez52
snr4.926237769251809
spacingtr1.75
spacingx3.0
spacingy3.0
spacingz3.0
spikes_num0
summarybgk31.626914867535582
summarybgmad70.95510864257812
summarybgmean363.9168701171875
summarybgmedian136.86981201171875
summarybgn246056.0
summarybgp0566.7396240234375
summarybgp951414.6500549316406
summarybgstdv746.3037109375
summaryfgk3.152821232473446
summaryfgmad1497.6063232421875
summaryfgmean8800.0322265625
summaryfgmedian8855.9853515625
summaryfgn39533.0
summaryfgp056118.286914062501
summaryfgp9511496.552734375
summaryfgstdv1797.695068359375
tsnr59.477783203125
AcquisitionMatrixPE80
AcquisitionNumber1
AcquisitionTime13:34:33.742500
BandwidthPerPixelPhaseEncode24.51
BaseResolution80
BodyPartExaminedBRAIN
CogAtlasIDTODO
CoilStringHE1-4;NE1_2
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20190410 GCC6.3.0
DerivedVendorReportedEchoSpacing0.000509996
DeviceSerialNumber166048
DwellTime2.8e-06
EchoTime0.029
EchoTrainLength80
EffectiveEchoSpacing0.000509996
FlipAngle74
ImageCommentsUnaliased_MB2_PE2_LB
ImageOrientationPatientDICOM[1, 0, 0, 0, 0.984503, -0.175367]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'MB', 'ND', 'NORM', 'MOSAIC']
ImagingFrequency123.246
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressNorth_13th_1701_Philadelphia_PA_US_19122
InstitutionNameTemple_University_-_Weiss_Hall
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma
ModalityMR
MultibandAccelerationFactor2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PhaseEncodingDirectionj-
PhaseEncodingSteps80
PhaseResolution1
PixelBandwidth2230
ProcedureStepDescriptionSmith_Lab_Smith_iStart
ProtocolNamecmrr_mbep2d_mb2_3mm_task-MID_run0
PulseSequenceDetails%CustomerSeq%_cmrr_mbep2d_bold
ReceiveCoilActiveElementsHE1-4;NE1,2
ReceiveCoilNameHeadNeck_20
ReconMatrixPE80
RepetitionTime1.75
SAR0.0759578
ScanOptionsFS
ScanningSequenceEP
SequenceNameepfid2d1_80
SequenceVariantSK_SS
SeriesDescriptioncmrr_mbep2d_mb2_3mm_task-MID_run0
SeriesNumber31
ShimSetting[1438, -7447, 6576, 227, 4, -68, 3, 34]
SliceThickness3
SliceTiming[0, 1.265, 0.7975, 0.3325, 1.5975, 1.1325, 0.665, 0.2, 1.465, 0.9975, 0.5325, 0.0675, 1.33, 0.865, 0.4, 1.6625, 1.1975, 0.7325, 0.2675, 1.53, 1.065, 0.6, 0.1325, 1.3975, 0.9325, 0.465, 0, 1.265, 0.7975, 0.3325, 1.5975, 1.1325, 0.665, 0.2, 1.465, 0.9975, 0.5325, 0.0675, 1.33, 0.865, 0.4, 1.6625, 1.1975, 0.7325, 0.2675, 1.53, 1.065, 0.6, 0.1325, 1.3975, 0.9325, 0.465]
SoftwareVersionssyngo_MR_E11
SpacingBetweenSlices3
StationNameAWP166048
TaskNameMID
TotalReadoutTime0.0402897
TxRefAmp308.386
WipMemBlock423d3da5-3d4b-4338-9cba-60dcf2c24cf0||Sequence: R016 ve11c/master r/e634e98; Dec 19 2017 11:00:25 by eja
md5sumf0fd35c489be0655b9fca80e58d99b47
softwaremriqc
version0.15.1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.